dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04338
Location and strand information: 121667 - 129697 (-)
Family: GH20|GH136
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8332
Protein molecular weight: 292691.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04339
Location and strand information: 130104 - 131717 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04340
Location and strand information: 131836 - 133662 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04341
Location and strand information: 134612 - 134815 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04342
Location and strand information: 134933 - 135772 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04343
Location and strand information: 135775 - 136656 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04344
Location and strand information: 136681 - 137979 (-)
Family: 3.A.1.1.44
Protein type: TC
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04345
Location and strand information: 138242 - 140443 (-)
Family: 2.A.6.4.2
Protein type: TC
Protein description: Protein translocase subunit SecDF

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04346
Location and strand information: 140511 - 140942 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04347
Location and strand information: 141238 - 141684 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04348
Location and strand information: 141804 - 143744 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.0118
Protein molecular weight: 73672.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04349
Location and strand information: 143778 - 144611 (-)
Family: 3.A.1.1.41
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04350
Location and strand information: 144613 - 145518 (-)
Family: 3.A.1.1.19
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04351
Location and strand information: 145750 - 147111 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04352
Location and strand information: 147226 - 148392 (-)
Family: 3.A.1.1.2
Protein type: TC
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04353
Location and strand information: 148433 - 149944 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04354
Location and strand information: 149925 - 151766 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04355
Location and strand information: 151930 - 158922 (-)
Family: GH121
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4379
Protein molecular weight: 254590.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_116|CGC4
Gene ID: MGYG000002403_04356
Location and strand information: 159576 - 160994 (-)
Family: 2.A.2.3.3
Protein type: TC
Protein description: Isoprimeverose transporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002403_04338	hypothetical protein	CAZyme	121667	129697	-	GH20\| GH136
MGYG000002403_04339	HTH-type transcriptional activator RhaR	TF	130104	131717	-	HTH_AraC+HTH_AraC
MGYG000002403_04340	hypothetical protein	TC	131836	133662	-	8.A.59.2.1
MGYG000002403_04341	hypothetical protein	null	134612	134815	-	No domain
MGYG000002403_04342	L-arabinose transport system permease protein AraQ	TC	134933	135772	-	3.A.1.1.28
MGYG000002403_04343	L-arabinose transport system permease protein AraP	TC	135775	136656	-	3.A.1.1.28
MGYG000002403_04344	Multiple sugar-binding protein	TC	136681	137979	-	3.A.1.1.44
MGYG000002403_04345	Protein translocase subunit SecDF	TC	138242	140443	-	2.A.6.4.2
MGYG000002403_04346	hypothetical protein	null	140511	140942	-	No domain
MGYG000002403_04347	hypothetical protein	null	141238	141684	+	Cupin_2
MGYG000002403_04348	Non-reducing end beta-L-arabinofuranosidase	CAZyme	141804	143744	-	GH127
MGYG000002403_04349	L-arabinose transport system permease protein AraQ	TC	143778	144611	-	3.A.1.1.41
MGYG000002403_04350	Lactose transport system permease protein LacF	TC	144613	145518	-	3.A.1.1.19
MGYG000002403_04351	hypothetical protein	STP	145750	147111	-	SBP_bac_1
MGYG000002403_04352	Cyclodextrin-binding protein	TC	147226	148392	-	3.A.1.1.2
MGYG000002403_04353	Chemotaxis response regulator protein-glutamate methylesterase	TF	148433	149944	-	HTH_AraC
MGYG000002403_04354	hypothetical protein	TC	149925	151766	-	8.A.59.2.1
MGYG000002403_04355	hypothetical protein	CAZyme	151930	158922	-	GH121
MGYG000002403_04356	Isoprimeverose transporter	TC	159576	160994	-	2.A.2.3.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature